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248 lines
11 KiB
248 lines
11 KiB
# Project: Web Reference Database (refbase) <http://www.refbase.net>
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# Copyright: Matthias Steffens <mailto:refbase@extracts.de> and the file's
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# original author(s).
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#
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# This code is distributed in the hope that it will be useful,
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# but WITHOUT ANY WARRANTY. Please see the GNU General Public
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# License for more details.
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#
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# File: ./update.sql
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# Repository: $HeadURL: file:///svn/p/refbase/code/branches/bleeding-edge/update.sql $
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# Author(s): Matthias Steffens <mailto:refbase@extracts.de>
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#
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# Created: 01-Mar-05, 16:54
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# Modified: $Date: 2013-09-27 21:45:07 +0000 (Fri, 27 Sep 2013) $
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# $Author: karnesky $
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# $Revision: 1382 $
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# This MySQL database structure file will update any refbase v0.8.0 database to v0.9.6
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# IMPORTANT: - If possible, use 'update.php' instead of this file to update an
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# existing refbase installation (v0.8.0 or above), please see the
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# 'UPDATE' file for further information.
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# - Do NOT use this file in an attempt to update refbase v0.9.x to v0.9.6,
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# please use 'update.php' instead.
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# --------------------------------------------------------
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#
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# update table `deleted`
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#
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ALTER TABLE `deleted` MODIFY COLUMN `edition` varchar(50) default NULL;
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ALTER TABLE `deleted` MODIFY COLUMN `thesis` enum('Bachelor''s thesis','Honours thesis','Master''s thesis','Ph.D. thesis','Diploma thesis','Doctoral thesis','Habilitation thesis') default NULL;
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ALTER TABLE `deleted` ADD COLUMN `version` mediumint(8) unsigned default 1 AFTER `modified_by`;
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# --------------------------------------------------------
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#
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# update table `depends`
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#
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INSERT INTO `depends` VALUES (NULL, 'pdftotext', 'true', NULL);
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# --------------------------------------------------------
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#
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# replace table `formats`
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#
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DROP TABLE IF EXISTS `formats`;
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CREATE TABLE `formats` (
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`format_id` mediumint(8) unsigned NOT NULL auto_increment,
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`format_name` varchar(100) default NULL,
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`format_type` enum('export','import','cite') NOT NULL default 'export',
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`format_enabled` enum('true','false') NOT NULL default 'true',
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`format_spec` varchar(255) default NULL,
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`order_by` varchar(25) default NULL,
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`depends_id` mediumint(8) unsigned NOT NULL default '0',
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PRIMARY KEY (`format_id`),
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KEY `format_name` (`format_name`)
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) TYPE=MyISAM;
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#
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# data for table `formats`
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#
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INSERT INTO `formats` VALUES (1, 'MODS XML', 'import', 'true', 'bibutils/import_modsxml2refbase.php', 'A160', 2),
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(2, 'MODS XML', 'export', 'true', 'export_modsxml.php', 'B160', 1),
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(3, 'Text (CSV)', 'export', 'false', 'export_textcsv.php', 'B105', 1),
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(4, 'BibTeX', 'import', 'true', 'bibutils/import_bib2refbase.php', 'A010', 2),
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(5, 'BibTeX', 'export', 'true', 'bibutils/export_xml2bib.php', 'B010', 2),
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(6, 'Endnote', 'import', 'true', 'bibutils/import_end2refbase.php', 'A040', 2),
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(7, 'Endnote XML', 'import', 'true', 'bibutils/import_endx2refbase.php', 'A045', 2),
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(8, 'Endnote', 'export', 'true', 'bibutils/export_xml2end.php', 'B040', 2),
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(9, 'Pubmed Medline', 'import', 'true', 'import_medline2refbase.php', 'A060', 1),
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(10, 'Pubmed XML', 'import', 'true', 'bibutils/import_med2refbase.php', 'A065', 2),
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(11, 'RIS', 'import', 'true', 'import_ris2refbase.php', 'A080', 1),
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(12, 'RIS', 'export', 'true', 'bibutils/export_xml2ris.php', 'B080', 2),
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(13, 'ISI', 'import', 'true', 'import_isi2refbase.php', 'A050', 1),
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(14, 'ISI', 'export', 'true', 'bibutils/export_xml2isi.php', 'B050', 2),
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(15, 'CSA', 'import', 'true', 'import_csa2refbase.php', 'A030', 1),
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(16, 'Copac', 'import', 'true', 'bibutils/import_copac2refbase.php', 'A020', 2),
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(17, 'SRW_MODS XML', 'export', 'true', 'export_srwxml.php', 'B195', 1),
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(18, 'ODF XML', 'export', 'true', 'export_odfxml.php', 'B180', 1),
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(19, 'Atom XML', 'export', 'true', 'export_atomxml.php', 'B140', 1),
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(20, 'html', 'cite', 'true', 'formats/cite_html.php', 'C010', 1),
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(21, 'RTF', 'cite', 'true', 'formats/cite_rtf.php', 'C020', 1),
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(22, 'PDF', 'cite', 'true', 'formats/cite_pdf.php', 'C030', 1),
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(23, 'LaTeX', 'cite', 'true', 'formats/cite_latex.php', 'C040', 1),
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(24, 'Markdown', 'cite', 'true', 'formats/cite_markdown.php', 'C050', 1),
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(25, 'ASCII', 'cite', 'true', 'formats/cite_ascii.php', 'C060', 1),
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(26, 'RefWorks', 'import', 'true', 'import_refworks2refbase.php', 'A070', 1),
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(27, 'SciFinder', 'import', 'true', 'import_scifinder2refbase.php', 'A090', 1),
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(28, 'Word XML', 'export', 'true', 'bibutils/export_xml2word.php', 'B200', 2),
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(29, 'LaTeX .bbl', 'cite', 'true', 'formats/cite_latex_bbl.php', 'C045', 1),
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(30, 'Text (Tab-Delimited)', 'import', 'true', 'import_tabdelim2refbase.php', 'A100', 1),
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(31, 'CrossRef XML', 'import', 'true', 'import_crossref2refbase.php', 'A150', 1),
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(32, 'OAI_DC XML', 'export', 'true', 'export_oaidcxml.php', 'B170', 1),
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(33, 'SRW_DC XML', 'export', 'true', 'export_srwxml.php', 'B190', 1),
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(34, 'ADS', 'export', 'true', 'bibutils/export_xml2ads.php', 'B005', 2),
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(35, 'arXiv XML', 'import', 'true', 'import_arxiv2refbase.php', 'A130', 1);
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# --------------------------------------------------------
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#
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# update table `languages`
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#
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INSERT INTO `languages` VALUES (NULL, 'fr', 'true', '3'),
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(NULL, 'es', 'false', '4'),
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(NULL, 'cn', 'true', '5'),
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(NULL, 'ru', 'true', '6'),
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(NULL, 'ja', 'true', '7');
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UPDATE `languages` SET `language_enabled` = 'true' WHERE `language_name` = 'de';
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# --------------------------------------------------------
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#
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# update table `refs`
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#
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ALTER TABLE `refs` MODIFY COLUMN `edition` varchar(50) default NULL;
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ALTER TABLE `refs` MODIFY COLUMN `thesis` enum('Bachelor''s thesis','Honours thesis','Master''s thesis','Ph.D. thesis','Diploma thesis','Doctoral thesis','Habilitation thesis') default NULL;
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ALTER TABLE `refs` ADD COLUMN `version` mediumint(8) unsigned default 1 AFTER `modified_by`;
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UPDATE `refs` SET `thesis` = NULL WHERE `thesis` = '';
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UPDATE `refs` SET `type` = 'Conference Article' WHERE `type` RLIKE '^(Unsupported: )?Conference Proceeding$';
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UPDATE `refs` SET `type` = 'Miscellaneous' WHERE `type` RLIKE '^(Unsupported: )?Generic$';
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UPDATE `refs` SET `type` = 'Newspaper Article' WHERE `type` RLIKE '^(Unsupported: )?Newspaper$';
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UPDATE `refs` SET `type` = 'Software' WHERE `type` RLIKE '^(Unsupported: )?Computer Program$';
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UPDATE `refs` SET `type` = REPLACE(`type`, "Unsupported: ", "") WHERE `type` RLIKE "^Unsupported: (Abstract|Conference (Article|Volume)|Magazine Article|Manual|Miscellaneous|Newspaper Article|Patent|Report|Software)$";
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# --------------------------------------------------------
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#
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# update table `styles`
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#
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UPDATE `styles` SET `style_spec` = REPLACE(`style_spec`,"cite_","styles/cite_") WHERE `style_spec` RLIKE "^cite_";
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INSERT INTO `styles` VALUES (NULL, 'Ann Glaciol', 'true', 'styles/cite_AnnGlaciol_JGlaciol.php', 'B010', 1),
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(NULL, 'J Glaciol', 'true', 'styles/cite_AnnGlaciol_JGlaciol.php', 'B030', 1),
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(NULL, 'APA', 'true', 'styles/cite_APA.php', 'A010', 1),
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(NULL, 'AMA', 'true', 'styles/cite_AMA.php', 'A020', 1),
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(NULL, 'MLA', 'true', 'styles/cite_MLA.php', 'A030', 1),
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(NULL, 'Chicago', 'true', 'styles/cite_Chicago.php', 'A070', 1),
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(NULL, 'Harvard 1', 'true', 'styles/cite_Harvard_1.php', 'A090', 1),
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(NULL, 'Harvard 2', 'true', 'styles/cite_Harvard_2.php', 'A093', 1),
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(NULL, 'Harvard 3', 'true', 'styles/cite_Harvard_3.php', 'A096', 1),
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(NULL, 'Vancouver', 'true', 'styles/cite_Vancouver.php', 'A110', 1);
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UPDATE `styles` SET `order_by` = 'C010' WHERE `style_name` = 'Text Citation';
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UPDATE `styles` SET `order_by` = 'B060' WHERE `style_name` = 'Polar Biol';
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UPDATE `styles` SET `order_by` = 'B040' WHERE `style_name` = 'Mar Biol';
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UPDATE `styles` SET `order_by` = 'B050' WHERE `style_name` = 'MEPS';
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UPDATE `styles` SET `order_by` = 'B020' WHERE `style_name` = 'Deep Sea Res';
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# --------------------------------------------------------
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#
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# update table `types`
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#
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UPDATE `types` SET `order_by` = '01' WHERE `type_name` = 'Journal Article';
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UPDATE `types` SET `order_by` = '02' WHERE `type_name` = 'Abstract';
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UPDATE `types` SET `order_by` = '03' WHERE `type_name` = 'Book Chapter';
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UPDATE `types` SET `order_by` = '04' WHERE `type_name` = 'Book Whole';
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UPDATE `types` SET `order_by` = '05' WHERE `type_name` = 'Conference Article';
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UPDATE `types` SET `order_by` = '06' WHERE `type_name` = 'Conference Volume';
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UPDATE `types` SET `order_by` = '07' WHERE `type_name` = 'Journal';
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UPDATE `types` SET `order_by` = '08' WHERE `type_name` = 'Magazine Article';
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UPDATE `types` SET `order_by` = '09' WHERE `type_name` = 'Manual';
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UPDATE `types` SET `order_by` = '10' WHERE `type_name` = 'Manuscript';
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UPDATE `types` SET `order_by` = '11' WHERE `type_name` = 'Map';
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UPDATE `types` SET `order_by` = '12' WHERE `type_name` = 'Miscellaneous';
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UPDATE `types` SET `order_by` = '13' WHERE `type_name` = 'Newspaper Article';
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UPDATE `types` SET `order_by` = '14' WHERE `type_name` = 'Patent';
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UPDATE `types` SET `order_by` = '15' WHERE `type_name` = 'Report';
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UPDATE `types` SET `order_by` = '16' WHERE `type_name` = 'Software';
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INSERT INTO `types` VALUES (NULL, 'Abstract', 'true', 2, '02'),
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(NULL, 'Conference Article', 'true', 2, '05'),
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(NULL, 'Conference Volume', 'true', 3, '06'),
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(NULL, 'Magazine Article', 'true', 1, '08'),
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(NULL, 'Manual', 'true', 3, '09'),
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(NULL, 'Miscellaneous', 'true', 3, '12'),
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(NULL, 'Newspaper Article', 'true', 1, '13'),
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(NULL, 'Patent', 'true', 3, '14'),
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(NULL, 'Report', 'true', 3, '15'),
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(NULL, 'Software', 'true', 3, '16');
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# --------------------------------------------------------
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#
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# add table `user_options`
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#
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DROP TABLE IF EXISTS `user_options`;
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CREATE TABLE `user_options` (
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`option_id` mediumint(8) unsigned NOT NULL auto_increment,
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`user_id` mediumint(8) unsigned NOT NULL default '0',
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`export_cite_keys` enum('yes','no') NOT NULL default 'yes',
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`autogenerate_cite_keys` enum('yes','no') NOT NULL default 'yes',
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`prefer_autogenerated_cite_keys` enum('no','yes') NOT NULL default 'no',
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`use_custom_cite_key_format` enum('no','yes') NOT NULL default 'no',
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`cite_key_format` varchar(255) default NULL,
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`uniquify_duplicate_cite_keys` enum('yes','no') NOT NULL default 'yes',
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`nonascii_chars_in_cite_keys` enum('transliterate','strip','keep') default NULL,
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`use_custom_text_citation_format` enum('no','yes') NOT NULL default 'no',
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`text_citation_format` varchar(255) default NULL,
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`records_per_page` smallint(5) unsigned default NULL,
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`show_auto_completions` enum('yes','no') NOT NULL default 'yes',
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`main_fields` text,
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PRIMARY KEY (`option_id`),
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KEY `user_id` (`user_id`)
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) TYPE=MyISAM;
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#
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# data for table `user_options`
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#
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INSERT INTO `user_options` VALUES (1, 0, 'yes', 'yes', 'no', 'no', '<:authors:><:year:>', 'yes', NULL, 'no', '<:authors[2| & | et al.]:>< :year:>< {:recordIdentifier:}>', NULL, 'yes', 'author, title, publication, keywords, abstract'),
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(2, 1, 'yes', 'yes', 'no', 'no', '<:firstAuthor:><:year:>', 'yes', NULL, 'no', '<:authors[2| & | et al.]:>< :year:>< {:recordIdentifier:}>', NULL, 'yes', 'author, title, publication, keywords, abstract');
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# --------------------------------------------------------
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#
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# alter table `user_permissions`
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#
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ALTER TABLE `user_permissions` ADD COLUMN `allow_browse_view` ENUM('yes', 'no') NOT NULL DEFAULT 'yes' AFTER `allow_print_view`;
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ALTER TABLE `user_permissions` ADD COLUMN `allow_list_view` ENUM('yes', 'no') NOT NULL DEFAULT 'yes' AFTER `allow_upload`;
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#
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# update table `user_permissions`
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#
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UPDATE `user_permissions` SET `allow_browse_view` = 'no';
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UPDATE `user_permissions` SET `allow_export` = 'yes', `allow_batch_export` = 'yes' WHERE `user_id` = 0;
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